People

The clinical department of Prof. Dr. med Daniel Seehofer performs more than 200 surgical interventions on the liver annually. Therefore, the group has access to a broad variety of liver tissues as well as corresponding patient, clinical laboratory and characterization data. I lead the experimental work group which has a longstandind expertise in the isolation, characterization and application of primary human liver and hepatoma cells. These cells as well as data generated from established liver ...

Junior Group Leader

Data management and standardization expert for systems biology and systems medicine, responsible for the data management user requirements and user contacts within the German LiSyM network (Liver Systems Medicine: http://lisym.org/) and associated to the FAIRDOM team. Involved in different standardization initiatives and committees, i.e. COMBINE (http://co.mbine.org), ISO/TC 276 Biotechnology (https://www.iso.org/committee/4514241.html), European COST action CHARME (http://www.cost-charme.eu) and ...

We are building digital pathology application for biomarker analysis in epidemiological and clinical studies. This includes management and supporting the creation of very large data collections from whole-slide imaging. In large epidemiological studies AI image analysis is validated yielding clinically useful biomarker analysis for translating research projects into applications.

Detailed Profile here

We are investigating liver metabolism and function with the help of computational models and methods.

Group Leader Dr. Matthias König

Institute for Theoretical Biology Humboldt-University Berlin Philippstraße 13, 10115 Berlin, Germany phone +49 30 2093-98435 koenigmx@hu-berlin.de https://www.livermetabolism.com

The König group works on computational modeling, data science, data management, bioinformatics methods and machine learning on ...

I am a researcher at the Scientific Databases and Visualization Group at Heidelberg Institute for Theoretical Studies (HITS) , one of the developers of SabioRK - System for the Analysis of Biochemical Pathways - Reaction Kinetics (http://sabiork.h-its.org/) . I am working on design and maintenance of the information systems to store, query and analyse systems biology data; definition and implementation of methods for the integration of data from multiple sources. In SySMO-DB project ...

I lead scientific research in the Biobank of the Department of General, Visceral and Transplant Surgery in Ludwig Maximilians University in Munich.

Group leader of the junior group: The Hedgehog Signalling Pathway (LiSyM-JGMMS)

I am a trained computer scientist (Habilitation) and physicist (Diploma). My interest is interactive search for information, as well as preparing data for FAIR reuse, a.k.a curation. Within LiSyM I am coordinator of the data management services.

Former postdoc in the Theoretical Biophysics group headed by Edda Klipp at Humboldt-Universität zu Berlin and member of the LiSyM network, I am now an independent Group Leader at the Technical University of Munich focusing on developing an advanced bioinformatics toolbox for analyzing, integrating, and mining of various omics data in the context of precision medicine as well as molecular disease and patient subtyping.

I am a trained biologist (PhD). Within LiSyM Cancer I am working for the central data management team in the Scientific Databases and Visualization (SDBV) Group at Heidelberg Institute for Theoretical Studies (HITS). Our main purpose is to support the members of the network in FAIR data management by offering 5 systems for data storage and exchange and by helping them using these systems. Before I was involved in the de.NBI project helping the systems biology community and beyond with content ...

Interested in modelling metabolism, predicting metabolic phenotypes and dynamic transitions in metabolism. Also using partially and incompletely characterized models (probabilistic predictions).

Postdoc, Andrej Shevchenko's lab , biological mass spectrometry, MPI-CBG, Dresden