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LiSyM: Liver Systems Medicine 2
LiSyM-Krebs - Systemmedizinisches Forschungsnetz zur Früherkennung und Prävention von Leberkrebs2
Project
LiSyM network2
LiSyM Pillar I: Early Metabolic Injury (LiSyM-EMI)1
LiSyM Pillar III: Regeneration and Repair in Acute-on-Chronic Liver Failure (LiSyM-ACLF)1
LiSyM-Krebs Partnering1
SMART-NAFLD1
Institution
University of Freiburg - Institute of Physics1
Humboldt-Universität zu Berlin - Institute of Biology1
Location
Germany2
Expertise
Dynamic modeling/dMod2
Tool
Dynamic modeling/dMod2
Cell and tissue culture11
Molecular Biology10
Immunohistochemistry9
qPCR8
confocal microscopy7
Mathematical Modelling6
Isolation and cultivation of mouse hepatocyte6
Metabolomics5
RNA analysis5
rtPCR4
Mouse surgery4
Computational and theoretical biology3
Cytometry and fluorescent microscopy3
Isolation purification and separation3
Python3
live cell imaging3
Biochemistry and protein analysis2
Cell biology2
Proteomics2
SBML2
Partial differential equations2
Databases2
Copasi2
PCR2
Cytoscape2
kinetic modelling2
openBis2
SED-ML2
FBA2
Morpheus2
Stability analysis2
Bifurcation analysis2
Multiscale simulation2
image analysis2
pharmacokinetics2
Computer Graphics2
Computer Simulations2
Biobanking2
Cell Isolation2
Microbiology1
Genetic analysis1
Immunological techniques1
Virology1
Model organisms1
ODE1
Algebraic equations1
Workflows1
Web services1
Microarray analysis1
Mass spectrometry1
Ruby on Rails1
Intravital imaging1
Ontologies1
Molecular Dynamics Simulations1
Javascript1
SEEK1
Protege1
JWS online RightFiled1
Mitochondrial disorders1
Milliplex analysis1
Laser scan microscopy1
Liver resection1
3D reconstruction1
in vivo 2-photon imaging1
Animal facility1
Qt1
PDEs1
Physiologically-based pharmacokinetic modelling1
Parameter estimation1
Data2Dynamics/d2d1
Parameter identifiability - Profile likelihood1
MorpheusML1
iPSCs1
in vitro differentiation1
microfluidics1
REIMS1
Digital Pathology1
AI1
Mouse experiments in vivo1
Isolation of primary cells (hepatocytes and non-parenchymal cells)1
ImageJ1
Image Processing1
flow cytometry1
FAIRDOM-SEEK1
SABIO-RK1
Mathematical Modeling1
Julia1
Agent-Based Modeling1
Nextcloud1
OMERO1
REDCap1
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PhD student Timmer group
Institute of Physics University of Freiburg Hermann-Herder-Straße 3, 79104 Freiburg, Germany phone +49 761 203 7710 svenja.kemmer ät fdm.uni-freiburg.de