Data files

Human DNA methylation data set GSM2819637 stored in NCBI (GEO)

Human DNA methylation data stored in NCBI (GEO) Dataset GSM2819626; liver tissue sample 7137_CV_RRBS https://seek.lisym.org/samples/236

HumanDNA methylation​ data stored in NCBI (GEO) Dataset GSM2819627; liver tissue sample 7157_CV_RRBS

Human DNA methylation data set GSM2819629 stored in NCBI (GEO)  liver tissue sample : 7173_CV_RRBS

Human DNA methylation data set GSM2819632 stored in NCBI (GEO)

sample data

HumanDNA methylation data set stored in NCBI (GEO) Data set GSM2819620;

GSM2819620_CV_6610_207 7344_PP_RNA; Homo sapiens; RNA-Seq SEEK Sample: 6610_CV_RRBS

[https://seek.lisym.org/samples/130 ]

This link contains 3 files:

GSM2819620_CV_6610_207.MCSv3.20161129.hs37.cpg.filtered.CG.bed.gz 109.4 Mb (ftp)(http) BED GSM2819620_CV_6610_207.MCSv3.20161129.hs37.cpg.filtered.CG.bw 85.6 Mb (ftp)(http) BW GSM2819620_CV_6610_207.MCSv3.20161129.hs37.cpg.filtered.CG.ct_coverage.bw 86.8 Mb (ftp)(http) BW

Human DNA methylation data set stored in NCBI (GEO) Data set GSM2819621 ; liver tissue sample 6758_CV_RRBS - this sample in SEEK [https://seek.lisym.org/samples/131]

HumanDNA methylation data set stored in NCBI (GEO) Data set GSM2819622;

liver tissue sample 6922_CV_RRBS https://seek.lisym.org/samples/132

Human DNA methylation data stored in NCBI (GEO) Dataset GSM2819623;

liver tissue sample** 6967_ CV_ RRBS** in SEEK https://seek.lisym.org/samples/133

HumanDNA methylation data stored in NCBI (GEO) Dataset GSM2819624; liver tissue sample 7012_ CV_ RRBS in SEEK [https://seek.lisym.org/samples/134]

Supplementary_files_format_and_content: RRBS: bed files contain genomic coordinates, methylation values and coverage of all covered CpGs of a sample; bigwig files (.CG.bw) contain methylation values and bigwig files (coverage_ct.bw) coverage information.

Patient characteristics by group (sample type based)

BACKGROUND & AIMS: Nonalcoholic fatty liver disease (NAFLD) is the most common chronic liver disorder in industrialized countries. Mouse models of NAFLD have been used in studies of pathogenesis and treatment, and have certain features of the human disease. We performed a systematic transcriptome-wide analysis of liver tissues from patients at different stages of NAFLD progression (ranging from healthy obese individuals to those with steatosis), as well as rodent models of NAFLD, to identify ...

BACKGROUND & AIMS: Nonalcoholic fatty liver disease (NAFLD) is the most common chronic liver disorder in industrialized countries. Mouse models of NAFLD have been used in studies of pathogenesis and treatment, and have certain features of the human disease. We performed a systematic transcriptome-wide analysis of liver tissues from patients at different stages of NAFLD progression (ranging from healthy obese individuals to those with steatosis), as well as rodent models of NAFLD, to identify ...