Projects: LiSyM Core Infrastructure and Management (LiSyM-PD), LiSyM PALs, LiSyM network, LiSyM Scientific Leadership Team (LiSyM-LT), LiSyM-Krebs Partnering, Forschungsnetzwerk LiSyM-Krebs, C-TIP-HCC network, SMART-NAFLD, DEEP-HCC network, Default_Project
Institutions: HITS gGmbH

Expertise: Data Management, Databases, Information Retrieval, Biocuration, FAIRDOM SEEK, Nextcloud
Tools: Java, Python, R, Groovy, Ruby, Docker, BERT, Llama, QuPath
I am a trained computer scientist (Habilitation) and physicist (Diploma). The topic of my Habilitation was distributed information retrieval of image data, i.e. how to find complex data via fuzzy queries. One key part of my work now is rendering data shared and FAIR (Findable, Accessible, Interoperable, Reusable) in order to make them useful for search and data integration. Since beginning of the Virtual Liver Network, through LiSyM I+II and now LiSyM-Cancer I am coordinator of the data management ...
Projects: The Hedgehog Signalling Pathway (LiSyM-JGMMS), Forschungsnetzwerk LiSyM-Krebs
Institutions: Universität Leipzig - Sächsischer Inkubator für Klinische Translation (SIKT)

Expertise: Data Management, Data Analysis, Python, Html
Tools: ImageJ, Image Processing
Projects: LiSyM PALs, Multi-Scale Models for Personalized Liver Function Tests (LiSyM-MM-PLF), LiSyM Pillar IV: Liver Function Diagnostics (LiSyM-LiFuDi), LiSyM network, LiSyM-Krebs Partnering
Institutions: Humboldt-Universität zu Berlin - Institute for Theoretical Biology (ITB)

We are investigating liver metabolism and function with the help of computational models and methods.
Group Leader Dr. Matthias König
Institute for Theoretical Biology Humboldt-University Berlin Philippstraße 13, 10115 Berlin, Germany phone +49 30 2093-98435 koenigmx@hu-berlin.de https://www.livermetabolism.com
The König group works on computational modeling, data science, data management, bioinformatics methods and machine learning on ...
Projects: LiSyM PALs, LiSyM network, LiSyM Core Infrastructure and Management (LiSyM-PD)
Institutions: HITS gGmbH
Expertise: computational biology, Data Management, Bioinformatics
Tools: Databases, Python, Ruby on Rails, Molecular Dynamics Simulations, Javascript